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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933041.1_cds_XP_016479449.1_70989
CDS Infomation

[gene=LOC107800740] [db_xref=GeneID:107800740] [protein=protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X2] [protein_id=XP_016479449.1] [location=complement(join(20293..20409,20493..20729,21250..21300,21949..22035,22358..22435,22702..22770,23407..23494,24336..24446,24813..25172,26023..26090))] [gbkey=CDS]
Sequence

ATGGACGAGCCTGGTCCATTGGAGCTTCTGAATCAATTAGAGGGCATATTGGAGTCTGAT
CCTCTAATTGATGAAATAGGGTTCATTCACCCATCCCAATTTTCTGCATTAAATGAGGAT
ATTGGGACTCCTTCAACATCTGTTGGTTCTGTGCCAAAGTCAAGTTTTGAGACAATTTTC
TGGGCTAGGGATCATAAGCTGGGCATCTCAACTAGGGTTCTCTTTCCGCTTTATGTTGCG
GCTAAAAATGCATTTGTGGATGCATATAAAAGTTATAAAGTGTACCATAGCATTTACAAC
GAGAGAGATGATAAAAGTGCTTCAACTTGTCCCTCATCTTCTCCACTTAGTCTCGAAAGT
GAATTGATGAAGCACAGCAGGGCACTTTTGCTTCTAAGTAGTGATTTTGGCTCAGCGTGG
AATTCCAGGAAGCTAGTTTTGTCAAAGAAGCAGTCTTTGTCCATGTTCATGAATGAGCTT
ATCTTTTCAGCTGCGGTTCTCTCGCATTCACCTAAAAGTGAACAAACGTGGAGCCAAAGG
TGGGTGATCAAGATGATTGCTGGAAATTGTTCAAATCTGCAAGAGATTATGGAAAGAGAA
TCCGAGTTAGTGAAAAAACTGGCTGAGAGATCAAAAATGAACTATCGTGCATGGAATCAC
CGTTGCTGGTTAGTTTCCTACATGTCAGCGGAACAGGTGCTGCAGGAGTTTGACAAGTCA
CGGCACTGGGCTGTGCTCCATGTTGCTGATAATTCTTGCTTTCATTACCGTGCGCGGTTG
ATGCTTCGTCTGTTTGAAGAATCACAGCATAACAAGGGTCGAGATGCTAGCTTTCATCCA
GAACTTCATGAATTGTTGAAGGATGAGTTCAACTGGGTGGAGAAGCTGATAAAACGTTAT
GTGGGGAGAGAGGCATTGTGGCTTCATCGCCGTTTCCTCTTGACATGCTGGATAAGATAT
TTTGCATGCGGTGATGATGATAGATCCTTGTCTTCTAACCAGAGAAACATTAGGACAGTT
GACATTGACATACTTATAGATAATGAATTAGAACTATTCCGTTCCTGCACAAATGTATAT
GATAGTGACTTTGAGGACTATCAAGCTCAAGCAACCTTTGCTGCAACTTATATGATGTGG
CTCAAAAAGCAACTATCGATGACTCTGGCAATTGATATTCAAAAGGTGGAAACGAGCAGA
TTGAAGTCAGTCCTAACTAATGTATACCCAGAAAAGAGCTTCCTTTGGAATTCTTTGCTT
GAATAA

Peptide Sequence

PEP ID

XP_016479449.1
PEP Infomation

PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X2 [Nicotiana tabacum]
Sequence

MDEPGPLELLNQLEGILESDPLIDEIGFIHPSQFSALNEDIGTPSTSVGSVPKSSFETIF
WARDHKLGISTRVLFPLYVAAKNAFVDAYKSYKVYHSIYNERDDKSASTCPSSSPLSLES
ELMKHSRALLLLSSDFGSAWNSRKLVLSKKQSLSMFMNELIFSAAVLSHSPKSEQTWSQR
WVIKMIAGNCSNLQEIMERESELVKKLAERSKMNYRAWNHRCWLVSYMSAEQVLQEFDKS
RHWAVLHVADNSCFHYRARLMLRLFEESQHNKGRDASFHPELHELLKDEFNWVEKLIKRY
VGREALWLHRRFLLTCWIRYFACGDDDRSLSSNQRNIRTVDIDILIDNELELFRSCTNVY
DSDFEDYQAQATFAATYMMWLKKQLSMTLAIDIQKVETSRLKSVLTNVYPEKSFLWNSLL
E

Transcript Sequence

Gene sequence data has not been registered.